in and around the lab

it's mostly science. articles, news, videos, links and random notes by a Hungarian molecular biologist.

Detecting (HIV diagnostic) antibodies with DNA nanomachines as FRET-based reporters

This is pretty amazing. I am not really familiar with this field, so I don’t really know what other sensors are around, I just like the the simplicity of the basic idea for this tool. 

image

Original publication:

A Modular, DNA-Based Beacon for Single-Step Fluorescence
Detection of Antibodies and Other Proteins


The abstract of the original article says:

A versatile platform for the one-step fluorescence detection of both monovalent and multivalent proteins has been developed. This system is based on a conformationswitching stem–loop DNA scaffold that presents a small molecule, polypeptide, or nucleic-acid recognition element on each of its two stem strands. The steric strain associated with the binding of one (multivalent) or two (monovalent) target molecules to these elements opens the stem, enhancing the emission of an attached fluorophore/quencher pair. The sensors respond rapidly (< 10 min) and selectively, enabling the facile detection of specific proteins even in complex samples, such as blood serum. The versatility of the platform was demonstrated by detecting five bivalent proteins (four antibodies and the chemokine platelet-derived growth factor) and two monovalent proteins (a Fab fragment and the transcription factor TBP) with low nanomolar detection limits and no detectable cross-reactivity.

Centimeter-long origami robot

This is a cute little fellow even if you are not really into robotics. The sad part is when it just dissolves in acetone (the permanent magnet remaines) or in water.

… or just put the ketchup on the side, not ON the fries, maaaan. :)

Spiders sprayed with carbon nanotubes spin superstrong webs

… they wandered out into the natural environs near their lab and collected a host of cellar spiders and carefully brought them back to their lab. They then proceeded to spray ten of them with a carbon nanotube solution and five with a graphene solution. Sadly, four of the spiders died shortly thereafter, and some produced poor quality webs, but a few of them produced webs that were actually stronger than their normal webs. Testing showed that some of the silk with nanotubes in it was 3.5 times as strong as giant riverine orb spider silk, which is considered the strongest natural spider silk. Also closer examination using Ramen spectroscopy revealed peaks in the silk where the nanotubes were present.

Read more at: http://phys.org/news/2015-05-spiders-carbon-nanotubes-superstrong-webs.html#jCp