in and around the lab

Month

October 2010

22 posts

Nature: Genomes by the thousand → nature.com

The 1000 Genomes Project, an international collaboration that will produce an extensive public catalogue of human genetic variation. The plan, in fact, is to sequence about 2,000 unidentified individuals from 20 populations around the world. 


  A nice summary on these projects is available in the current issue of Nature.


Oct 28, 20106 notes
#genomics #HGP #genome project #nature #science #research #1000 genomes
iGEM 2010 - Team: Debrecen-HUNGARY → 2010.igem.org

I am proud to present Hungary’s first iGEM team from Debrecen!


Out of twelve university students a broad range of disciplinarians may be found: five molecular biology master students, six students of the medicine faculty and one student of the medical research laboratory field. Culturally speaking, we have representatives from Hungary, Israel and Taiwan (three different continents). Beyond plain laboratory work we got a feel of each cultures work, fun and life definitions.

Our wiki page has just been finished. It’s been quite a challenge and fun at the same time to organize ourselves and make this interesting project running.

In summary the Nuclear Receptor Toolkit developped by us allows the (1) ultra sensitive detection of xenobiotic activators in the environment (e.g. oil derived traces in water and soil), (2) the assessment of lipid soluble vitamins, steroids, xenobiotics in food and (3) the potential of inducing specific genetic programs in transfected cells or modell organisms with a possibility to destroy these modified cells by an independent tetracyclin induced apoptosis effector system.

But the best part is still to come. MIT, Boston, here we come. 

Oct 27, 20103 notes
#iGEM #Boston #MIT #research #science #Debrecen #Hungary #synthetic biology
Environment Wildlife Photographer of the Year title goes to Hungarian photographer → edition.cnn.com

Congrats!

Hungarian photographer Bence Mate has won the 2010 Veolia Environment Wildlife Photographer of the Year title. Have a look all the other photos in the Gallery. 

A fantastic collection.

Oct 23, 20103 notes
#photographer #wildlife #Hungarian
“There are three kinds of lies: lies, damned lies and statistics.” —

Mark Twain

Happy “World Statistics Day, 2010”! 

Oct 20, 20104 notes
#statistics #2010 #twain #science
Genome-building from the bottom up → nature.com

iGEM 2010 is approaching … so here is some synthetic biology. A fresh note from Nature.

Take eight tiny DNA strands just 60 nucleotides long, combine with a master mix of enzymes and reagents, and incubate at 50ºC for an hour. By following this simple recipe, researchers could synthesize the genome of a mouse mitochondrion in just five days. 

… and a ‘classic‘ article on the first synthetic bacterial cell by the Craig J. Venter Institute, from Science. 

The only DNA in the cells is the designed synthetic DNA sequence, including “watermark” sequences and other designed gene deletions and polymorphisms, and mutations acquired during the building process.The new cells have expected phenotypic properties and are capable of continuous self-replication.

Oct 10, 20105 notes
#iGEM #nature #synthetic biology #venter #science #genetics #molecular biology
Fantastic blog! ;) Thought you might like this: Tim Minchin on religion and evolution :) http://serialmatrix.tumblr.com/post/1060819140/comedian-tim-minchins-skit-about-darwin-god-and

Thanks! Both for your words and the suggestion!

Oct 9, 20103 notes
India's "toxic" Hindu idols choke rivers → edition.cnn.com

The immersion of thousands of statues of Hindu gods containing toxic chemicals into India’s rivers and lakes every year poses a pollution threat as festivals become increasingly commercialized.

Luckily, eco-friendly and biodegradable Ganesh idols celebrate increasing sales.

(From Reuters and CNN) 


Oct 9, 20104 notes
#india #ganesh #pollution #chemicals #toxic #ecology #Environment #cnn
Play
Oct 9, 2010
#robocup #robot #istanbul
Play
Oct 8, 2010
#dawkins #darwin #evolution #Religion #speech #TED
BI0NUMB3R5 - A database of biological numbers → bionumbers.hms.harvard.edu

Just came across with this one:

The search engine for the numbers in biology. Choose an organism, select a topic, or just check the most breathtaking numbers that surround us. Great site.


Oct 8, 201010 notes
#numbers #biology #bionumber #science
The Hungarian sludge spill → blogs.nature.com

  A disaster never seen before hit my home country, Hungary. It’s unbelievable, startling and sad. 

Rivers and lakes in 12 European countries are in danger of being contaminated as toxic sludge from an alumina factory heads towards the Danube. Red sludge is a byproduct of the refining of bauxite into alumina, the basic material for manufacturing aluminium. It is common to store treated sludge in ponds where the water eventually evaporates, leaving behind a dried red clay-like soil. A state of emergency in three counties was announced yesterday after the dam burst released a torrent of toxic red sludge that swept through local villages. Four people were killed, three reported missing and 120 were injured. 

 Cars drifted into the middle of surrounding field, dead bodies of domestic animals laying about on the streets covered in red sludge. I think, that area in northwest Hungary will never be populated again.

  This image basically tells it all. The sludge is highly alkalic (that causes most of the problem now, getting closer and closer to the Danube).

Oct 7, 20103 notes
#red #sludge #Hungary #disaster #alkalic
Global map of small-particle concentration in the air → nasa.gov

In Africa it might be the sandstorm, but in China and India, the picture is quite frightening. Check this amazing video of the black carbon soot movement. 

Oct 6, 20103 notes
#AIR #particle #pollution #NASA #map
Ig Nobel 2000 ... and Nobel Prize 2010. What a collection! → ru.nl

This is just beautiful:

Andre Geim was one of the two researchers who won this year’s Nobel Prize in Physics. But that is just not the first occasion him being a Nobel laureate. In 2000 he got one for his work in Nijmegen (NL) that presented a levitating frog in strong magnetic field (~antigravity!). Altough that was an Ig Nobel.

  Just remember what Ig Nobel is about:

to honor achievements that first make people laugh, and then make them think. 

Find the original article in Eur. J. Phys. here.


Science CAN be death serious AND fun.

Congratulations!

Oct 6, 20104 notes
#Ig Nobel #Nobel Prize #physics #science #fun
Lasker Awards: America's Nobels

  An annual award given away for major contributions in medical sciences in four main cathegories: “basic / clinical / special achievement / public service”. 76 Lasker laureates have received the Nobel Prize (wikipedia). My boss has just called our attention that in 2001 it was Robert Edwards, who won the Lasker. 

  So, which topic might get into focus next year?

  microRNA, stem cells, nuclear hormone receptors or obesity?

Oct 5, 20103 notes
#Lasker #Nobel Prize #medicine #award #stem cell #biology
An irrelevant comment on the just-announced Nobel Prize for Medicine ... by the Vatican → heraldsun.com.au

and a more important one from the first IVF-baby:

It’s fantastic news. Me and mum are so glad that one of the pioneers of IVF has been given the recognition he deserves. We hold Bob in great affection and are delighted to send our personal congratulations to him and his family at this time. 

Oct 5, 20103 notes
#Nobel Prize #medicine #2010 #vatican #IVF #felrtilization #science
The Nobel Prize in Physics 2010 for groundbreaking experiments regarding the two-dimensional material graphene  → static.nobelprize.org

Jointly to Andre Geim and Konstantin Novoselov.

It is worth reading this nice summary on the scientific and industrial potentials of this remarkable material. Or check the ‘light version’.

Transparent + dense + thin + strong + acts as a conductor. The kick-off publication :

   Science 22 October 2004:
Vol. 306. no. 5696, pp. 666 - 669

 
Oct 5, 20102 notes
#Nobel Prize #physics #2010 #science #graphene
Oct 5, 20102,529 notes
#music #vinyl #microscopy #record #geek
The Nobel Prize in Physiology or Medicine 2010 for the development of in vitro fertilization → nobelprize.org

to Robert G. Edwards.

image

Oct 4, 20104 notes
#nobel prize #in vitro #felrtilization #Robert g edwards #medicine #research
Play
Oct 3, 20102 notes
#manakin #moonwalk #bird
Adapting to Darkness → chemlife.umd.edu

Linking Behavior, Genetics, and Evolution.


Oct 2, 20103 notes
#genetics #evolution #research #cave fish #blind
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